Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 LINC02228-204ENST00000642115 2962 ntBASIC14.15□□□□□ -0.14
SKP1P63208 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SKP1P63208 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SKP1P63208 AJ011931.1-201ENST00000618749 2492 ntBASIC14.15□□□□□ -0.14
SKP1P63208 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
SKP1P63208 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SKP1P63208 MIR193BHG-211ENST00000641433 5365 ntBASIC14.14□□□□□ -0.15
SKP1P63208 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 ANKRD19P-201ENST00000338192 862 ntBASIC14.14□□□□□ -0.15
SKP1P63208 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 AC004945.1-201ENST00000416738 983 ntBASIC14.14□□□□□ -0.15
SKP1P63208 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.14□□□□□ -0.15
SKP1P63208 CNN2P10-201ENST00000443067 918 ntBASIC14.14□□□□□ -0.15
SKP1P63208 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 PPY2P-201ENST00000582808 702 ntBASIC14.14□□□□□ -0.15
SKP1P63208 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 AC004466.1-201ENST00000599515 1080 ntBASIC14.14□□□□□ -0.15
SKP1P63208 AC002472.3-201ENST00000640124 621 ntBASIC14.14□□□□□ -0.15
SKP1P63208 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SKP1P63208 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.14□□□□□ -0.15
SKP1P63208 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 AC011840.2-201ENST00000563063 1520 ntBASIC14.14□□□□□ -0.15
SKP1P63208 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SKP1P63208 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SKP1P63208 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.13□□□□□ -0.15
SKP1P63208 AC092135.3-201ENST00000624151 1846 ntBASIC14.13□□□□□ -0.15
SKP1P63208 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 AC018442.1-201ENST00000421439 2061 ntBASIC14.13□□□□□ -0.15
SKP1P63208 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SKP1P63208 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 AC099336.1-201ENST00000417053 1171 ntBASIC14.13□□□□□ -0.15
SKP1P63208 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.13□□□□□ -0.15
SKP1P63208 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 AC131206.1-201ENST00000538078 1211 ntBASIC14.13□□□□□ -0.15
SKP1P63208 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 C2orf69P2-201ENST00000562032 1123 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms