Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC138969.3-201ENST00000546612 1459 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 AC138932.2-201ENST00000548268 1459 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 AC126755.4-201ENST00000549796 1459 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.13□□□□□ -0.31
SEC61A1P61619 MYCLP2-201ENST00000449268 967 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 GAPDHP21-201ENST00000450301 1010 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.13□□□□□ -0.31
SEC61A1P61619 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.13□□□□□ -0.31
SEC61A1P61619 MIR8072-201ENST00000614241 80 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SEC61A1P61619 AL158212.4-201ENST00000624062 1286 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.13□□□□□ -0.31
SEC61A1P61619 AL358472.5-202ENST00000641448 1267 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.13□□□□□ -0.31
SEC61A1P61619 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.13□□□□□ -0.31
SEC61A1P61619 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
SEC61A1P61619 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SEC61A1P61619 MST1P2-201ENST00000457982 2291 ntBASIC13.13□□□□□ -0.31
SEC61A1P61619 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
SEC61A1P61619 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SEC61A1P61619 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SEC61A1P61619 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.12□□□□□ -0.31
SEC61A1P61619 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SEC61A1P61619 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.12□□□□□ -0.31
SEC61A1P61619 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.12□□□□□ -0.31
SEC61A1P61619 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 AC113367.3-201ENST00000508316 1912 ntBASIC13.12□□□□□ -0.31
SEC61A1P61619 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.12□□□□□ -0.31
SEC61A1P61619 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.12□□□□□ -0.31
SEC61A1P61619 NME2P1-201ENST00000426182 414 ntBASIC13.12□□□□□ -0.31
SEC61A1P61619 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.12□□□□□ -0.31
SEC61A1P61619 ELK1P1-201ENST00000485699 580 ntBASIC13.12□□□□□ -0.31
SEC61A1P61619 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.12□□□□□ -0.31
SEC61A1P61619 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.12□□□□□ -0.31
SEC61A1P61619 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.12□□□□□ -0.31
SEC61A1P61619 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.12□□□□□ -0.31
SEC61A1P61619 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.12□□□□□ -0.31
SEC61A1P61619 CTBP2P3-201ENST00000585629 1255 ntBASIC13.12□□□□□ -0.31
SEC61A1P61619 AC097359.3-201ENST00000603982 1210 ntBASIC13.12□□□□□ -0.31
SEC61A1P61619 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SEC61A1P61619 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.12□□□□□ -0.31
SEC61A1P61619 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.12□□□□□ -0.31
SEC61A1P61619 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.12□□□□□ -0.31
SEC61A1P61619 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.12□□□□□ -0.31
SEC61A1P61619 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SEC61A1P61619 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SEC61A1P61619 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 AC063926.2-201ENST00000623766 1308 ntBASIC13.12□□□□□ -0.31
SEC61A1P61619 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SEC61A1P61619 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SEC61A1P61619 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms