Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
FOXG1P55316 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
FOXG1P55316 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
FOXG1P55316 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
FOXG1P55316 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 AC140479.7-201ENST00000636301 2332 ntBASIC12.99□□□□□ -0.33
FOXG1P55316 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.99□□□□□ -0.33
FOXG1P55316 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.99□□□□□ -0.33
FOXG1P55316 ALG3P1-201ENST00000508806 1114 ntBASIC12.99□□□□□ -0.33
FOXG1P55316 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.99□□□□□ -0.33
FOXG1P55316 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.99□□□□□ -0.33
FOXG1P55316 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.99□□□□□ -0.33
FOXG1P55316 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.99□□□□□ -0.33
FOXG1P55316 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
FOXG1P55316 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 AP001267.2-201ENST00000532619 2086 ntBASIC12.99□□□□□ -0.33
FOXG1P55316 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
FOXG1P55316 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 AC244394.1-201ENST00000435000 1665 ntBASIC12.99□□□□□ -0.33
FOXG1P55316 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
FOXG1P55316 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.98□□□□□ -0.33
FOXG1P55316 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.98□□□□□ -0.33
FOXG1P55316 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.98□□□□□ -0.33
FOXG1P55316 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.98□□□□□ -0.33
FOXG1P55316 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms