Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LIMK2P53671 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LIMK2P53671 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 AL139094.1-201ENST00000405549 1188 ntBASIC15.02■□□□□ -0
LIMK2P53671 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.02■□□□□ -0
LIMK2P53671 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.02■□□□□ -0
LIMK2P53671 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LIMK2P53671 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
LIMK2P53671 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.02■□□□□ -0
LIMK2P53671 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.02■□□□□ -0
LIMK2P53671 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
LIMK2P53671 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.02■□□□□ -0
LIMK2P53671 BX539320.1-201ENST00000623759 877 ntBASIC15.02■□□□□ -0
LIMK2P53671 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.02■□□□□ -0
LIMK2P53671 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.02□□□□□ -0.01
LIMK2P53671 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
LIMK2P53671 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.02□□□□□ -0.01
LIMK2P53671 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
LIMK2P53671 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.02□□□□□ -0.01
LIMK2P53671 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
LIMK2P53671 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LIMK2P53671 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.02□□□□□ -0.01
LIMK2P53671 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LIMK2P53671 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LIMK2P53671 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 AC134312.5-201ENST00000568031 1313 ntBASIC15.01□□□□□ -0.01
LIMK2P53671 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.01□□□□□ -0.01
LIMK2P53671 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.01□□□□□ -0.01
LIMK2P53671 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.01□□□□□ -0.01
LIMK2P53671 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LIMK2P53671 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LIMK2P53671 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.01□□□□□ -0.01
LIMK2P53671 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.01□□□□□ -0.01
LIMK2P53671 AC012441.1-201ENST00000446669 685 ntBASIC15.01□□□□□ -0.01
LIMK2P53671 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.01□□□□□ -0.01
LIMK2P53671 AC093433.1-201ENST00000458048 571 ntBASIC15.01□□□□□ -0.01
LIMK2P53671 AC022494.1-201ENST00000466044 728 ntBASIC15.01□□□□□ -0.01
LIMK2P53671 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.01□□□□□ -0.01
LIMK2P53671 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.01□□□□□ -0.01
LIMK2P53671 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.01□□□□□ -0.01
LIMK2P53671 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.01□□□□□ -0.01
LIMK2P53671 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LIMK2P53671 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.01□□□□□ -0.01
LIMK2P53671 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 AC005252.2-201ENST00000624630 1141 ntBASIC15.01□□□□□ -0.01
LIMK2P53671 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.01□□□□□ -0.01
LIMK2P53671 REXO1L6P-201ENST00000603433 1515 ntBASIC15.01□□□□□ -0.01
LIMK2P53671 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.01□□□□□ -0.01
LIMK2P53671 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.01□□□□□ -0.01
LIMK2P53671 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
LIMK2P53671 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LIMK2P53671 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15□□□□□ -0.01
LIMK2P53671 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15□□□□□ -0.01
LIMK2P53671 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15□□□□□ -0.01
LIMK2P53671 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15□□□□□ -0.01
LIMK2P53671 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 AC092933.1-201ENST00000393644 945 ntBASIC15□□□□□ -0.01
LIMK2P53671 RPL7P3-201ENST00000441388 714 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms