Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF144AP50876 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF144AP50876 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 RN7SL752P-201ENST00000463779 287 ntBASIC13.91□□□□□ -0.18
RNF144AP50876 RN7SL692P-201ENST00000464677 288 ntBASIC13.91□□□□□ -0.18
RNF144AP50876 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 TDH-203ENST00000531764 1110 ntBASIC13.91□□□□□ -0.18
RNF144AP50876 AC010319.3-201ENST00000597028 470 ntBASIC13.91□□□□□ -0.18
RNF144AP50876 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RNF144AP50876 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF144AP50876 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF144AP50876 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 AC067750.1-201ENST00000608826 6545 ntBASIC13.9□□□□□ -0.18
RNF144AP50876 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RNF144AP50876 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RNF144AP50876 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
RNF144AP50876 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF144AP50876 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 AP006294.1-201ENST00000415407 339 ntBASIC13.9□□□□□ -0.18
RNF144AP50876 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF144AP50876 AL162726.2-201ENST00000438986 1017 ntBASIC13.9□□□□□ -0.18
RNF144AP50876 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF144AP50876 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF144AP50876 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF144AP50876 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
RNF144AP50876 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 AC025048.6-201ENST00000634326 1161 ntBASIC13.9□□□□□ -0.18
RNF144AP50876 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms