Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 AC023794.5-201ENST00000564380 2157 ntBASIC11.83□□□□□ -0.52
CDC34P49427 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CDC34P49427 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CDC34P49427 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC34P49427 AC020910.6-201ENST00000623084 1459 ntBASIC11.83□□□□□ -0.52
CDC34P49427 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 AC012617.1-204ENST00000586340 2305 ntBASIC11.82□□□□□ -0.52
CDC34P49427 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CDC34P49427 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CDC34P49427 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CDC34P49427 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CDC34P49427 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.82□□□□□ -0.52
CDC34P49427 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 SPDYE11-202ENST00000450699 704 ntBASIC11.82□□□□□ -0.52
CDC34P49427 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.82□□□□□ -0.52
CDC34P49427 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.82□□□□□ -0.52
CDC34P49427 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.82□□□□□ -0.52
CDC34P49427 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.82□□□□□ -0.52
CDC34P49427 SPDYE9P-201ENST00000570642 692 ntBASIC11.82□□□□□ -0.52
CDC34P49427 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CDC34P49427 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 SPDYE10P-202ENST00000612005 668 ntBASIC11.82□□□□□ -0.52
CDC34P49427 SPDYE8P-202ENST00000612377 668 ntBASIC11.82□□□□□ -0.52
CDC34P49427 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
CDC34P49427 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC34P49427 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
CDC34P49427 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms