Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM23P36406 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM23P36406 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.59□□□□□ -0.07
TRIM23P36406 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM23P36406 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM23P36406 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM23P36406 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM23P36406 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.58□□□□□ -0.07
TRIM23P36406 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRIM23P36406 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM23P36406 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRIM23P36406 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM23P36406 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM23P36406 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
TRIM23P36406 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM23P36406 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.58□□□□□ -0.08
TRIM23P36406 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 HIST2H2BC-201ENST00000498492 580 ntBASIC14.58□□□□□ -0.08
TRIM23P36406 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM23P36406 AC022217.1-201ENST00000521069 738 ntBASIC14.58□□□□□ -0.08
TRIM23P36406 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM23P36406 AC103988.2-201ENST00000561804 725 ntBASIC14.58□□□□□ -0.08
TRIM23P36406 SNORD3B-2-202ENST00000571722 791 ntBASIC14.58□□□□□ -0.08
TRIM23P36406 AL645939.5-201ENST00000606834 243 ntBASIC14.58□□□□□ -0.08
TRIM23P36406 AC090164.2-201ENST00000611487 516 ntBASIC14.58□□□□□ -0.08
TRIM23P36406 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRIM23P36406 AL136295.7-201ENST00000619226 1200 ntBASIC14.58□□□□□ -0.08
TRIM23P36406 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRIM23P36406 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM23P36406 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM23P36406 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM23P36406 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM23P36406 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 AC139712.1-201ENST00000378256 1875 ntBASIC14.57□□□□□ -0.08
TRIM23P36406 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.57□□□□□ -0.08
TRIM23P36406 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRIM23P36406 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRIM23P36406 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRIM23P36406 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 AL645933.1-201ENST00000440087 609 ntBASIC14.57□□□□□ -0.08
TRIM23P36406 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM23P36406 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
TRIM23P36406 AL160314.3-201ENST00000556041 767 ntBASIC14.57□□□□□ -0.08
TRIM23P36406 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.57□□□□□ -0.08
TRIM23P36406 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM23P36406 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 NDUFV2P1-201ENST00000596415 907 ntBASIC14.57□□□□□ -0.08
TRIM23P36406 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRIM23P36406 AC100757.4-201ENST00000626934 759 ntBASIC14.57□□□□□ -0.08
TRIM23P36406 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms