Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.9■□□□□ 0.14
HOXC8P31273 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.9■□□□□ 0.14
HOXC8P31273 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HOXC8P31273 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HOXC8P31273 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.9■□□□□ 0.14
HOXC8P31273 RPL18AP8-201ENST00000486071 528 ntBASIC15.9■□□□□ 0.14
HOXC8P31273 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.9■□□□□ 0.14
HOXC8P31273 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.9■□□□□ 0.14
HOXC8P31273 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.9■□□□□ 0.14
HOXC8P31273 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HOXC8P31273 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HOXC8P31273 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HOXC8P31273 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HOXC8P31273 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.9■□□□□ 0.14
HOXC8P31273 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HOXC8P31273 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
HOXC8P31273 AC018529.2-202ENST00000611482 3087 ntBASIC15.9■□□□□ 0.14
HOXC8P31273 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HOXC8P31273 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.89■□□□□ 0.13
HOXC8P31273 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC018463.1-201ENST00000456674 917 ntBASIC15.89■□□□□ 0.13
HOXC8P31273 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.89■□□□□ 0.13
HOXC8P31273 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 RN7SL665P-201ENST00000578793 300 ntBASIC15.89■□□□□ 0.13
HOXC8P31273 MIR2392-201ENST00000584881 84 ntBASIC15.89■□□□□ 0.13
HOXC8P31273 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HOXC8P31273 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC073911.3-201ENST00000624401 631 ntBASIC15.89■□□□□ 0.13
HOXC8P31273 AL161773.1-201ENST00000624845 863 ntBASIC15.89■□□□□ 0.13
HOXC8P31273 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC023157.3-201ENST00000619086 2088 ntBASIC15.89■□□□□ 0.13
HOXC8P31273 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HOXC8P31273 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
HOXC8P31273 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HOXC8P31273 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.89■□□□□ 0.13
HOXC8P31273 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.89■□□□□ 0.13
HOXC8P31273 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.89■□□□□ 0.13
HOXC8P31273 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms