Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
EPHA3P29320 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.52□□□□□ -0.09
EPHA3P29320 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 ZNF890P-202ENST00000530367 1156 ntBASIC14.52□□□□□ -0.09
EPHA3P29320 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.52□□□□□ -0.09
EPHA3P29320 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
EPHA3P29320 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 AL596442.2-201ENST00000610240 980 ntBASIC14.52□□□□□ -0.09
EPHA3P29320 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
EPHA3P29320 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
EPHA3P29320 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 UPF3AP3-201ENST00000420996 769 ntBASIC14.51□□□□□ -0.09
EPHA3P29320 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 AC114501.2-201ENST00000439631 535 ntBASIC14.51□□□□□ -0.09
EPHA3P29320 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.51□□□□□ -0.09
EPHA3P29320 AC125807.1-201ENST00000483097 614 ntBASIC14.51□□□□□ -0.09
EPHA3P29320 HLA-J-203ENST00000494367 1087 ntBASIC14.51□□□□□ -0.09
EPHA3P29320 MEIS3P1-201ENST00000495167 958 ntBASIC14.51□□□□□ -0.09
EPHA3P29320 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.51□□□□□ -0.09
EPHA3P29320 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.51□□□□□ -0.09
EPHA3P29320 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.51□□□□□ -0.09
EPHA3P29320 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.51□□□□□ -0.09
EPHA3P29320 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 MYADML-201ENST00000474610 2147 ntBASIC14.51□□□□□ -0.09
EPHA3P29320 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EPHA3P29320 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
EPHA3P29320 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EPHA3P29320 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
EPHA3P29320 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
EPHA3P29320 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.5□□□□□ -0.09
EPHA3P29320 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.5□□□□□ -0.09
EPHA3P29320 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
EPHA3P29320 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.5□□□□□ -0.09
EPHA3P29320 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
EPHA3P29320 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EPHA3P29320 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 309.7 ms