Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTGFP29279 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTGFP29279 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.33■□□□□ 0.2
CTGFP29279 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.33■□□□□ 0.2
CTGFP29279 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTGFP29279 AC136621.1-201ENST00000624017 2304 ntBASIC16.33■□□□□ 0.2
CTGFP29279 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CTGFP29279 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTGFP29279 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTGFP29279 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.32■□□□□ 0.2
CTGFP29279 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.32■□□□□ 0.2
CTGFP29279 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.32■□□□□ 0.2
CTGFP29279 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.32■□□□□ 0.2
CTGFP29279 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.32■□□□□ 0.2
CTGFP29279 AC006529.1-201ENST00000459978 637 ntBASIC16.32■□□□□ 0.2
CTGFP29279 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.32■□□□□ 0.2
CTGFP29279 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
CTGFP29279 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.32■□□□□ 0.2
CTGFP29279 KRT18P37-201ENST00000520711 1282 ntBASIC16.32■□□□□ 0.2
CTGFP29279 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 KLF17P1-201ENST00000547105 1126 ntBASIC16.32■□□□□ 0.2
CTGFP29279 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.32■□□□□ 0.2
CTGFP29279 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.32■□□□□ 0.2
CTGFP29279 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CTGFP29279 NAV1-210ENST00000593583 726 ntBASIC16.32■□□□□ 0.2
CTGFP29279 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.32■□□□□ 0.2
CTGFP29279 AL365203.3-201ENST00000609742 2057 ntBASIC16.32■□□□□ 0.2
CTGFP29279 HCG11-201ENST00000411553 5696 ntBASIC16.32■□□□□ 0.2
CTGFP29279 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.32■□□□□ 0.2
CTGFP29279 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTGFP29279 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.31■□□□□ 0.2
CTGFP29279 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.31■□□□□ 0.2
CTGFP29279 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.31■□□□□ 0.2
CTGFP29279 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 AL109809.1-201ENST00000418979 1367 ntBASIC16.31■□□□□ 0.2
CTGFP29279 PCDHA1-201ENST00000378133 2726 ntBASIC16.31■□□□□ 0.2
CTGFP29279 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTGFP29279 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 AC106827.1-201ENST00000366454 431 ntBASIC16.31■□□□□ 0.2
CTGFP29279 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.31■□□□□ 0.2
CTGFP29279 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CTGFP29279 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.31■□□□□ 0.2
CTGFP29279 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.31■□□□□ 0.2
CTGFP29279 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTGFP29279 AC023141.7-201ENST00000430646 407 ntBASIC16.31■□□□□ 0.2
CTGFP29279 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.31■□□□□ 0.2
CTGFP29279 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.31■□□□□ 0.2
CTGFP29279 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.31■□□□□ 0.2
CTGFP29279 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.31■□□□□ 0.2
CTGFP29279 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 RN7SL375P-201ENST00000492442 298 ntBASIC16.31■□□□□ 0.2
CTGFP29279 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.31■□□□□ 0.2
CTGFP29279 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.31■□□□□ 0.2
CTGFP29279 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTGFP29279 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.31■□□□□ 0.2
CTGFP29279 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.31■□□□□ 0.2
CTGFP29279 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTGFP29279 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.31■□□□□ 0.2
CTGFP29279 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTGFP29279 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CTGFP29279 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms