Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.97□□□□□ -0.17
CHMP24386 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.97□□□□□ -0.17
CHMP24386 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.97□□□□□ -0.17
CHMP24386 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CHMP24386 AC009486.1-201ENST00000569860 813 ntBASIC13.97□□□□□ -0.17
CHMP24386 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.97□□□□□ -0.17
CHMP24386 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 AL359881.3-201ENST00000602640 1721 ntBASIC13.97□□□□□ -0.17
CHMP24386 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 ST20-AS1-201ENST00000560255 4223 ntBASIC13.97□□□□□ -0.17
CHMP24386 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CHMP24386 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHMP24386 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
CHMP24386 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CHMP24386 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 ACKR1-201ENST00000368121 1240 ntBASIC13.96□□□□□ -0.17
CHMP24386 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.96□□□□□ -0.17
CHMP24386 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CHMP24386 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.96□□□□□ -0.17
CHMP24386 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.96□□□□□ -0.17
CHMP24386 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.96□□□□□ -0.17
CHMP24386 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.96□□□□□ -0.17
CHMP24386 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.96□□□□□ -0.17
CHMP24386 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.96□□□□□ -0.17
CHMP24386 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CHMP24386 AP001063.1-201ENST00000568332 529 ntBASIC13.96□□□□□ -0.17
CHMP24386 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.96□□□□□ -0.17
CHMP24386 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.96□□□□□ -0.17
CHMP24386 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.96□□□□□ -0.17
CHMP24386 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.96□□□□□ -0.17
CHMP24386 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.96□□□□□ -0.17
CHMP24386 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.96□□□□□ -0.17
CHMP24386 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHMP24386 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CHMP24386 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHMP24386 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CHMP24386 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHMP24386 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.96□□□□□ -0.18
CHMP24386 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms