Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ITGA6P23229 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ITGA6P23229 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ITGA6P23229 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.14■□□□□ 0.49
ITGA6P23229 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 HINT2P1-201ENST00000419438 481 ntBASIC18.14■□□□□ 0.49
ITGA6P23229 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.14■□□□□ 0.49
ITGA6P23229 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 CEP164P1-201ENST00000455142 418 ntBASIC18.14■□□□□ 0.49
ITGA6P23229 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.14■□□□□ 0.49
ITGA6P23229 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.14■□□□□ 0.49
ITGA6P23229 RN7SL190P-201ENST00000582519 257 ntBASIC18.14■□□□□ 0.49
ITGA6P23229 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.14■□□□□ 0.49
ITGA6P23229 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 AC068587.6-202ENST00000641839 5619 ntBASIC18.14■□□□□ 0.49
ITGA6P23229 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ITGA6P23229 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITGA6P23229 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.13■□□□□ 0.49
ITGA6P23229 AC015688.4-201ENST00000580780 1647 ntBASIC18.13■□□□□ 0.49
ITGA6P23229 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.13■□□□□ 0.49
ITGA6P23229 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.13■□□□□ 0.49
ITGA6P23229 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 POU5F1P2-201ENST00000521750 823 ntBASIC18.13■□□□□ 0.49
ITGA6P23229 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.13■□□□□ 0.49
ITGA6P23229 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.13■□□□□ 0.49
ITGA6P23229 AC003686.1-201ENST00000550956 1034 ntBASIC18.13■□□□□ 0.49
ITGA6P23229 PRKXP1-201ENST00000561423 1122 ntBASIC18.13■□□□□ 0.49
ITGA6P23229 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.13■□□□□ 0.49
ITGA6P23229 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.13■□□□□ 0.49
ITGA6P23229 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.13■□□□□ 0.49
ITGA6P23229 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.13■□□□□ 0.49
ITGA6P23229 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.13■□□□□ 0.49
ITGA6P23229 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.13■□□□□ 0.49
ITGA6P23229 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ITGA6P23229 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITGA6P23229 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 LINC01165-201ENST00000445190 1623 ntBASIC18.12■□□□□ 0.49
ITGA6P23229 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ITGA6P23229 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.12■□□□□ 0.49
ITGA6P23229 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.12■□□□□ 0.49
ITGA6P23229 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ITGA6P23229 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.12■□□□□ 0.49
ITGA6P23229 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ITGA6P23229 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 OR2R1P-201ENST00000441404 914 ntBASIC18.12■□□□□ 0.49
ITGA6P23229 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.12■□□□□ 0.49
ITGA6P23229 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.12■□□□□ 0.49
ITGA6P23229 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 AC006453.1-201ENST00000636037 1257 ntBASIC18.12■□□□□ 0.49
ITGA6P23229 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.12■□□□□ 0.49
ITGA6P23229 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITGA6P23229 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 308.2 ms