Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 FAM86MP-201ENST00000340703 885 ntBASIC15.03■□□□□ -0
XPAP23025 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.03■□□□□ -0
XPAP23025 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 MIR326-201ENST00000362220 95 ntBASIC15.03■□□□□ -0
XPAP23025 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.03■□□□□ -0
XPAP23025 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.03■□□□□ -0
XPAP23025 AC004945.1-201ENST00000416738 983 ntBASIC15.03■□□□□ -0
XPAP23025 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.03■□□□□ -0
XPAP23025 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.03■□□□□ -0
XPAP23025 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.03■□□□□ -0
XPAP23025 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
XPAP23025 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
XPAP23025 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.03■□□□□ -0
XPAP23025 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.03■□□□□ -0
XPAP23025 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.03■□□□□ -0
XPAP23025 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.03■□□□□ -0
XPAP23025 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.03■□□□□ -0
XPAP23025 AC138696.2-201ENST00000607376 223 ntBASIC15.03■□□□□ -0
XPAP23025 AC244157.2-201ENST00000616239 1006 ntBASIC15.03■□□□□ -0
XPAP23025 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.03■□□□□ -0
XPAP23025 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.03■□□□□ -0
XPAP23025 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
XPAP23025 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.03■□□□□ -0
XPAP23025 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.03■□□□□ -0
XPAP23025 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
XPAP23025 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.03■□□□□ -0
XPAP23025 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
XPAP23025 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
XPAP23025 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.02■□□□□ -0
XPAP23025 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
XPAP23025 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.02■□□□□ -0
XPAP23025 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.02■□□□□ -0
XPAP23025 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
XPAP23025 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.02■□□□□ -0
XPAP23025 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 TCAF2P1-201ENST00000291129 2421 ntBASIC15.02■□□□□ -0
XPAP23025 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.02■□□□□ -0
XPAP23025 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
XPAP23025 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.02■□□□□ -0
XPAP23025 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.02■□□□□ -0
XPAP23025 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 RN7SKP175-201ENST00000408472 289 ntBASIC15.02■□□□□ -0
XPAP23025 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.02■□□□□ -0
XPAP23025 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
XPAP23025 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
XPAP23025 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.02■□□□□ -0
XPAP23025 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
XPAP23025 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.02■□□□□ -0
XPAP23025 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.02■□□□□ -0
XPAP23025 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.02■□□□□ -0
XPAP23025 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.02■□□□□ -0
XPAP23025 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
XPAP23025 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
XPAP23025 AL023775.1-201ENST00000454907 1746 ntBASIC15.02□□□□□ -0.01
XPAP23025 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
XPAP23025 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
XPAP23025 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.02□□□□□ -0.01
XPAP23025 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.02□□□□□ -0.01
XPAP23025 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
XPAP23025 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.02□□□□□ -0.01
XPAP23025 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms