Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL1P22362 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.77□□□□□ -0.37
CCL1P22362 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.77□□□□□ -0.37
CCL1P22362 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL1P22362 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL1P22362 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 AC126755.1-201ENST00000525846 6405 ntBASIC12.77□□□□□ -0.37
CCL1P22362 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL1P22362 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 FKBP4P6-201ENST00000457486 1332 ntBASIC12.77□□□□□ -0.37
CCL1P22362 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 CICP16-201ENST00000502609 2813 ntBASIC12.77□□□□□ -0.37
CCL1P22362 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCL1P22362 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL1P22362 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 MSTO2P-201ENST00000314835 1709 ntBASIC12.76□□□□□ -0.37
CCL1P22362 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL1P22362 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CCL1P22362 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCL1P22362 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 HSPA8P5-201ENST00000456928 2069 ntBASIC12.76□□□□□ -0.37
CCL1P22362 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL1P22362 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL1P22362 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCL1P22362 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL1P22362 RN7SL204P-201ENST00000582831 262 ntBASIC12.76□□□□□ -0.37
CCL1P22362 RPSAP52-203ENST00000622976 1023 ntBASIC12.76□□□□□ -0.37
CCL1P22362 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 AC134312.5-201ENST00000568031 1313 ntBASIC12.76□□□□□ -0.37
CCL1P22362 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCL1P22362 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCL1P22362 AC010327.5-201ENST00000586923 3061 ntBASIC12.76□□□□□ -0.37
CCL1P22362 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL1P22362 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL1P22362 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL1P22362 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CCL1P22362 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CCL1P22362 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CCL1P22362 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CCL1P22362 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CCL1P22362 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CCL1P22362 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CCL1P22362 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.75□□□□□ -0.37
CCL1P22362 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL1P22362 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL1P22362 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms