Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 AL157414.3-201ENST00000624276 1954 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 AC136604.1-202ENST00000425471 771 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.49□□□□□ -0.41
CXCL3P19876 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 AC105339.3-201ENST00000560043 636 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.49□□□□□ -0.41
CXCL3P19876 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.49□□□□□ -0.41
CXCL3P19876 AC005593.1-201ENST00000624894 515 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CXCL3P19876 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 AC102953.2-201ENST00000609755 3026 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CXCL3P19876 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.49□□□□□ -0.41
CXCL3P19876 AC027369.3-201ENST00000530465 3707 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 AL645937.6-201ENST00000641122 3727 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 MYADML-201ENST00000474610 2147 ntBASIC12.49□□□□□ -0.41
CXCL3P19876 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CXCL3P19876 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CXCL3P19876 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 AP003969.2-201ENST00000623739 2275 ntBASIC12.48□□□□□ -0.41
CXCL3P19876 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CXCL3P19876 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.48□□□□□ -0.41
CXCL3P19876 AC140658.5-201ENST00000438532 169 ntBASIC12.48□□□□□ -0.41
CXCL3P19876 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 FAM197Y8-203ENST00000450145 560 ntBASIC12.48□□□□□ -0.41
CXCL3P19876 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.48□□□□□ -0.41
CXCL3P19876 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.48□□□□□ -0.41
CXCL3P19876 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.48□□□□□ -0.41
CXCL3P19876 AC074044.1-201ENST00000609673 707 ntBASIC12.48□□□□□ -0.41
CXCL3P19876 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CXCL3P19876 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CXCL3P19876 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.48□□□□□ -0.41
CXCL3P19876 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CXCL3P19876 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms