Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.84■□□□□ 0.45
NCLP19338 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 AC241585.1-201ENST00000433527 519 ntBASIC17.84■□□□□ 0.45
NCLP19338 KRT18P64-201ENST00000434946 1219 ntBASIC17.84■□□□□ 0.45
NCLP19338 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.84■□□□□ 0.45
NCLP19338 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.84■□□□□ 0.45
NCLP19338 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.84■□□□□ 0.45
NCLP19338 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.84■□□□□ 0.45
NCLP19338 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NCLP19338 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NCLP19338 AC089987.1-201ENST00000551654 2209 ntBASIC17.84■□□□□ 0.45
NCLP19338 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 AC018442.1-201ENST00000421439 2061 ntBASIC17.84■□□□□ 0.45
NCLP19338 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NCLP19338 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.83■□□□□ 0.45
NCLP19338 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC17.83■□□□□ 0.45
NCLP19338 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCLP19338 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.45
NCLP19338 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCLP19338 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.83■□□□□ 0.45
NCLP19338 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
NCLP19338 AL035456.1-201ENST00000456064 1369 ntBASIC17.83■□□□□ 0.45
NCLP19338 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.83■□□□□ 0.44
NCLP19338 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
NCLP19338 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.83■□□□□ 0.44
NCLP19338 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.83■□□□□ 0.44
NCLP19338 AC074338.1-201ENST00000416825 156 ntBASIC17.83■□□□□ 0.44
NCLP19338 TSPY16P-201ENST00000449843 468 ntBASIC17.83■□□□□ 0.44
NCLP19338 AL512638.1-201ENST00000457493 794 ntBASIC17.83■□□□□ 0.44
NCLP19338 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.83■□□□□ 0.44
NCLP19338 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 AC027369.6-201ENST00000525520 931 ntBASIC17.83■□□□□ 0.44
NCLP19338 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.83■□□□□ 0.44
NCLP19338 AC015910.1-201ENST00000579400 975 ntBASIC17.83■□□□□ 0.44
NCLP19338 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.83■□□□□ 0.44
NCLP19338 SPDYE12P-201ENST00000618416 771 ntBASIC17.83■□□□□ 0.44
NCLP19338 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 AC092135.3-201ENST00000624151 1846 ntBASIC17.83■□□□□ 0.44
NCLP19338 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.83■□□□□ 0.44
NCLP19338 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
NCLP19338 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
NCLP19338 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCLP19338 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.83■□□□□ 0.44
NCLP19338 AC152010.1-201ENST00000415779 2006 ntBASIC17.82■□□□□ 0.44
NCLP19338 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 REXO1L4P-201ENST00000605109 1937 ntBASIC17.82■□□□□ 0.44
NCLP19338 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NCLP19338 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.82■□□□□ 0.44
NCLP19338 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.82■□□□□ 0.44
NCLP19338 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 HLA-V-204ENST00000476601 1289 ntBASIC17.82■□□□□ 0.44
NCLP19338 AC004890.2-204ENST00000481968 304 ntBASIC17.82■□□□□ 0.44
NCLP19338 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.82■□□□□ 0.44
NCLP19338 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms