Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCAP17252 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PRKCAP17252 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCAP17252 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCAP17252 RN7SL692P-201ENST00000464677 288 ntBASIC13.87□□□□□ -0.19
PRKCAP17252 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCAP17252 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PRKCAP17252 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCAP17252 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCAP17252 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCAP17252 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PRKCAP17252 CLUHP6-201ENST00000580789 941 ntBASIC13.87□□□□□ -0.19
PRKCAP17252 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.87□□□□□ -0.19
PRKCAP17252 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCAP17252 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.87□□□□□ -0.19
PRKCAP17252 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.87□□□□□ -0.19
PRKCAP17252 PRSS30P-206ENST00000641773 873 ntBASIC13.87□□□□□ -0.19
PRKCAP17252 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PRKCAP17252 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PRKCAP17252 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
PRKCAP17252 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PRKCAP17252 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCAP17252 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
PRKCAP17252 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCAP17252 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCAP17252 FGD5P1-202ENST00000614866 2498 ntBASIC13.86□□□□□ -0.19
PRKCAP17252 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 AL157414.3-201ENST00000624276 1954 ntBASIC13.86□□□□□ -0.19
PRKCAP17252 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCAP17252 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.86□□□□□ -0.19
PRKCAP17252 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.86□□□□□ -0.19
PRKCAP17252 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCAP17252 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.86□□□□□ -0.19
PRKCAP17252 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 AP001063.1-201ENST00000568332 529 ntBASIC13.86□□□□□ -0.19
PRKCAP17252 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCAP17252 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
PRKCAP17252 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 AL928921.2-201ENST00000641325 2442 ntBASIC13.86□□□□□ -0.19
PRKCAP17252 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PRKCAP17252 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCAP17252 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
PRKCAP17252 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
PRKCAP17252 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCAP17252 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms