Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC090857.1-201ENST00000527400 390 ntBASIC17.03■□□□□ 0.32
BMP3P12645 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.03■□□□□ 0.32
BMP3P12645 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
BMP3P12645 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BMP3P12645 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.03■□□□□ 0.32
BMP3P12645 NORAD-201ENST00000565493 5339 ntBASIC17.03■□□□□ 0.32
BMP3P12645 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BMP3P12645 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
BMP3P12645 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
BMP3P12645 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.02■□□□□ 0.32
BMP3P12645 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 AC006504.5-208ENST00000588784 2401 ntBASIC17.02■□□□□ 0.32
BMP3P12645 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
BMP3P12645 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.02■□□□□ 0.32
BMP3P12645 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.02■□□□□ 0.32
BMP3P12645 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.02■□□□□ 0.32
BMP3P12645 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 AC018529.2-202ENST00000611482 3087 ntBASIC17.02■□□□□ 0.32
BMP3P12645 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BMP3P12645 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BMP3P12645 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.02■□□□□ 0.32
BMP3P12645 ISCA2P1-201ENST00000425548 448 ntBASIC17.02■□□□□ 0.32
BMP3P12645 AC006335.1-201ENST00000445200 547 ntBASIC17.02■□□□□ 0.32
BMP3P12645 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.02■□□□□ 0.32
BMP3P12645 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.02■□□□□ 0.32
BMP3P12645 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.02■□□□□ 0.32
BMP3P12645 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.02■□□□□ 0.32
BMP3P12645 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.02■□□□□ 0.32
BMP3P12645 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.02■□□□□ 0.32
BMP3P12645 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.02■□□□□ 0.32
BMP3P12645 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.02■□□□□ 0.32
BMP3P12645 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 FGFR3P5-201ENST00000564496 886 ntBASIC17.02■□□□□ 0.32
BMP3P12645 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.02■□□□□ 0.32
BMP3P12645 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BMP3P12645 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BMP3P12645 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BMP3P12645 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
BMP3P12645 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BMP3P12645 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BMP3P12645 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BMP3P12645 AC104640.1-201ENST00000562617 2109 ntBASIC17.02■□□□□ 0.31
BMP3P12645 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.01■□□□□ 0.31
BMP3P12645 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.01■□□□□ 0.31
BMP3P12645 KRT8P19-201ENST00000551916 1455 ntBASIC17.01■□□□□ 0.31
BMP3P12645 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.01■□□□□ 0.31
BMP3P12645 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.01■□□□□ 0.31
BMP3P12645 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.01■□□□□ 0.31
BMP3P12645 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.01■□□□□ 0.31
BMP3P12645 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.01■□□□□ 0.31
BMP3P12645 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.01■□□□□ 0.31
BMP3P12645 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.01■□□□□ 0.31
BMP3P12645 AL157813.1-201ENST00000612996 587 ntBASIC17.01■□□□□ 0.31
BMP3P12645 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.01■□□□□ 0.31
BMP3P12645 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.01■□□□□ 0.31
BMP3P12645 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BMP3P12645 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
BMP3P12645 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BMP3P12645 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms