Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 CYP46A4P-201ENST00000414953 267 ntBASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 ALG3P1-201ENST00000508806 1114 ntBASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 AC022217.1-201ENST00000521069 738 ntBASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB40ALP0C0E4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 RNMTL1P1-201ENST00000454103 560 ntBASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AL645939.5-201ENST00000606834 243 ntBASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AC004899.1-201ENST00000424687 1714 ntBASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB40ALP0C0E4 AC005089.1-201ENST00000619486 2241 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms