Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXC6P09630 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HOXC6P09630 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXC6P09630 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HOXC6P09630 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 AC009093.10-201ENST00000641956 1442 ntBASIC16.6■□□□□ 0.25
HOXC6P09630 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC6P09630 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXC6P09630 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC6P09630 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC6P09630 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC6P09630 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC6P09630 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXC6P09630 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.59■□□□□ 0.25
HOXC6P09630 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC6P09630 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXC6P09630 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXC6P09630 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HOXC6P09630 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC6P09630 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 KRT8P28-201ENST00000433288 1390 ntBASIC16.59■□□□□ 0.25
HOXC6P09630 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC6P09630 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HOXC6P09630 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC6P09630 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.58■□□□□ 0.25
HOXC6P09630 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
HOXC6P09630 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC6P09630 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HOXC6P09630 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC6P09630 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
HOXC6P09630 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC6P09630 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC6P09630 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC6P09630 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 Z69890.1-201ENST00000382990 339 ntBASIC16.58■□□□□ 0.24
HOXC6P09630 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXC6P09630 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 DUX4L50-201ENST00000455245 715 ntBASIC16.58■□□□□ 0.24
HOXC6P09630 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 AC027237.1-201ENST00000560942 655 ntBASIC16.58■□□□□ 0.24
HOXC6P09630 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 AL022334.2-201ENST00000610000 484 ntBASIC16.58■□□□□ 0.24
HOXC6P09630 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HOXC6P09630 AC005618.3-201ENST00000624928 458 ntBASIC16.58■□□□□ 0.24
HOXC6P09630 MRPL37P1-201ENST00000592451 1337 ntBASIC16.58■□□□□ 0.24
HOXC6P09630 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.58■□□□□ 0.24
HOXC6P09630 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.58■□□□□ 0.24
HOXC6P09630 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXC6P09630 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.58■□□□□ 0.24
HOXC6P09630 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.58■□□□□ 0.24
HOXC6P09630 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HOXC6P09630 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC6P09630 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms