Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.39■□□□□ 0.05
CD48P09326 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.39■□□□□ 0.05
CD48P09326 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CD48P09326 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CD48P09326 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.39■□□□□ 0.05
CD48P09326 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CD48P09326 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 AL137784.3-201ENST00000623858 2288 ntBASIC15.38■□□□□ 0.05
CD48P09326 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CD48P09326 AC215219.1-201ENST00000400706 1817 ntBASIC15.38■□□□□ 0.05
CD48P09326 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.38■□□□□ 0.05
CD48P09326 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.38■□□□□ 0.05
CD48P09326 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 CICP16-201ENST00000502609 2813 ntBASIC15.38■□□□□ 0.05
CD48P09326 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 TPM3P8-201ENST00000330554 643 ntBASIC15.38■□□□□ 0.05
CD48P09326 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.38■□□□□ 0.05
CD48P09326 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CD48P09326 RN7SKP175-201ENST00000408472 289 ntBASIC15.38■□□□□ 0.05
CD48P09326 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.38■□□□□ 0.05
CD48P09326 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.38■□□□□ 0.05
CD48P09326 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.38■□□□□ 0.05
CD48P09326 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CD48P09326 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.38■□□□□ 0.05
CD48P09326 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.38■□□□□ 0.05
CD48P09326 BTNL10-201ENST00000595971 695 ntBASIC15.38■□□□□ 0.05
CD48P09326 AP001002.3-201ENST00000623482 206 ntBASIC15.38■□□□□ 0.05
CD48P09326 AC132938.4-201ENST00000623835 848 ntBASIC15.38■□□□□ 0.05
CD48P09326 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.38■□□□□ 0.05
CD48P09326 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CD48P09326 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.38■□□□□ 0.05
CD48P09326 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.38■□□□□ 0.05
CD48P09326 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.38■□□□□ 0.05
CD48P09326 AC011498.7-201ENST00000624986 2027 ntBASIC15.38■□□□□ 0.05
CD48P09326 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD48P09326 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CD48P09326 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CD48P09326 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.37■□□□□ 0.05
CD48P09326 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 AP000593.2-201ENST00000542775 1433 ntBASIC15.37■□□□□ 0.05
CD48P09326 CU639417.3-201ENST00000624240 1404 ntBASIC15.37■□□□□ 0.05
CD48P09326 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.37■□□□□ 0.05
CD48P09326 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
CD48P09326 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
CD48P09326 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 NME2P1-201ENST00000426182 414 ntBASIC15.37■□□□□ 0.05
CD48P09326 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.37■□□□□ 0.05
CD48P09326 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 RNA5SP486-201ENST00000515961 83 ntBASIC15.37■□□□□ 0.05
CD48P09326 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.37■□□□□ 0.05
CD48P09326 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.37■□□□□ 0.05
CD48P09326 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CD48P09326 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms