Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SFTPBP07988 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.03□□□□□ -0.32
SFTPBP07988 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.03□□□□□ -0.32
SFTPBP07988 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.03□□□□□ -0.32
SFTPBP07988 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.03□□□□□ -0.32
SFTPBP07988 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.03□□□□□ -0.32
SFTPBP07988 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.03□□□□□ -0.32
SFTPBP07988 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.03□□□□□ -0.32
SFTPBP07988 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
SFTPBP07988 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
SFTPBP07988 AC023310.3-201ENST00000557027 670 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 AC100756.1-201ENST00000562736 682 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 AC138749.3-201ENST00000567691 622 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 AC092337.1-201ENST00000568699 1129 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.03□□□□□ -0.32
SFTPBP07988 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 AC027307.3-201ENST00000594262 1100 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 AC116165.1-201ENST00000611806 668 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 AC025048.6-201ENST00000634326 1161 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 CICP20-201ENST00000443330 2801 ntBASIC13.03□□□□□ -0.32
SFTPBP07988 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.03□□□□□ -0.32
SFTPBP07988 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SFTPBP07988 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
SFTPBP07988 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SFTPBP07988 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SFTPBP07988 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.03□□□□□ -0.32
SFTPBP07988 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SFTPBP07988 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
SFTPBP07988 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.02□□□□□ -0.32
SFTPBP07988 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.02□□□□□ -0.32
SFTPBP07988 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.02□□□□□ -0.32
SFTPBP07988 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.02□□□□□ -0.32
SFTPBP07988 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.02□□□□□ -0.32
SFTPBP07988 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
SFTPBP07988 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SFTPBP07988 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.02□□□□□ -0.32
SFTPBP07988 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
SFTPBP07988 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SFTPBP07988 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SFTPBP07988 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 AC005034.1-201ENST00000426657 489 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 DFFBP1-201ENST00000433250 979 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 AL353779.1-201ENST00000434793 351 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 RN7SL692P-201ENST00000464677 288 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 AC093004.1-201ENST00000508850 424 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.02□□□□□ -0.33
SFTPBP07988 AC005225.4-201ENST00000557330 545 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SFTPBP07988 SAMD11P1-201ENST00000571429 661 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 AC140912.1-201ENST00000577171 1054 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 AL158212.4-201ENST00000624062 1286 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 AL035252.4-201ENST00000624174 288 ntBASIC13.02□□□□□ -0.33
SFTPBP07988 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SFTPBP07988 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms