Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 LINC01101-201ENST00000622953 1884 ntBASIC13.57□□□□□ -0.24
P04436 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.57□□□□□ -0.24
P04436 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
P04436 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.57□□□□□ -0.24
P04436 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.57□□□□□ -0.24
P04436 AC010141.1-201ENST00000411585 623 ntBASIC13.57□□□□□ -0.24
P04436 FAM58BP-201ENST00000439056 645 ntBASIC13.57□□□□□ -0.24
P04436 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.57□□□□□ -0.24
P04436 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.57□□□□□ -0.24
P04436 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.57□□□□□ -0.24
P04436 AC131206.1-201ENST00000538078 1211 ntBASIC13.57□□□□□ -0.24
P04436 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.57□□□□□ -0.24
P04436 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 BX088702.1-201ENST00000610784 235 ntBASIC13.57□□□□□ -0.24
P04436 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.57□□□□□ -0.24
P04436 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.57□□□□□ -0.24
P04436 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04436 AL136172.1-201ENST00000598590 1394 ntBASIC13.57□□□□□ -0.24
P04436 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.56□□□□□ -0.24
P04436 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.56□□□□□ -0.24
P04436 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.56□□□□□ -0.24
P04436 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
P04436 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
P04436 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
P04436 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P04436 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
P04436 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P04436 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P04436 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.56□□□□□ -0.24
P04436 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.56□□□□□ -0.24
P04436 PUDPP3-201ENST00000445368 636 ntBASIC13.56□□□□□ -0.24
P04436 AL035414.1-201ENST00000451327 857 ntBASIC13.56□□□□□ -0.24
P04436 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.56□□□□□ -0.24
P04436 AC022494.1-201ENST00000466044 728 ntBASIC13.56□□□□□ -0.24
P04436 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.56□□□□□ -0.24
P04436 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.56□□□□□ -0.24
P04436 MIR3615-201ENST00000581999 87 ntBASIC13.56□□□□□ -0.24
P04436 AC020914.3-201ENST00000594712 304 ntBASIC13.56□□□□□ -0.24
P04436 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
P04436 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.56□□□□□ -0.24
P04436 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
P04436 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P04436 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.56□□□□□ -0.24
P04436 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.56□□□□□ -0.24
P04436 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.56□□□□□ -0.24
P04436 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04436 E2F3P2-201ENST00000447755 1422 ntBASIC13.56□□□□□ -0.24
P04436 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04436 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04436 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04436 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04436 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04436 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04436 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms