Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND3P03897 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.25■□□□□ 0.03
MT-ND3P03897 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
MT-ND3P03897 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND3P03897 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND3P03897 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MT-ND3P03897 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND3P03897 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MT-ND3P03897 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MT-ND3P03897 GNAQP1-201ENST00000444815 1067 ntBASIC15.24■□□□□ 0.03
MT-ND3P03897 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.24■□□□□ 0.03
MT-ND3P03897 TPRX2P-201ENST00000535362 881 ntBASIC15.24■□□□□ 0.03
MT-ND3P03897 AL359881.2-201ENST00000602973 570 ntBASIC15.24■□□□□ 0.03
MT-ND3P03897 AC099568.2-201ENST00000609194 695 ntBASIC15.24■□□□□ 0.03
MT-ND3P03897 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND3P03897 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MT-ND3P03897 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MT-ND3P03897 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND3P03897 SLC7A15P-201ENST00000424028 1363 ntBASIC15.24■□□□□ 0.03
MT-ND3P03897 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 MBLAC2-202ENST00000514906 1936 ntBASIC15.23■□□□□ 0.03
MT-ND3P03897 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
MT-ND3P03897 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 MST1P2-201ENST00000457982 2291 ntBASIC15.23■□□□□ 0.03
MT-ND3P03897 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND3P03897 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-ND3P03897 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 AC022447.6-201ENST00000515522 438 ntBASIC15.23■□□□□ 0.03
MT-ND3P03897 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-ND3P03897 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 TIMM17BP1-201ENST00000545713 516 ntBASIC15.23■□□□□ 0.03
MT-ND3P03897 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND3P03897 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 AC004461.2-201ENST00000629517 803 ntBASIC15.23■□□□□ 0.03
MT-ND3P03897 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND3P03897 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms