Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRNA1P02708 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRNA1P02708 PGAM1P5-201ENST00000548011 764 ntBASIC16.01■□□□□ 0.15
CHRNA1P02708 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.01■□□□□ 0.15
CHRNA1P02708 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CHRNA1P02708 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.01■□□□□ 0.15
CHRNA1P02708 SIGLEC18P-201ENST00000602271 909 ntBASIC16.01■□□□□ 0.15
CHRNA1P02708 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.01■□□□□ 0.15
CHRNA1P02708 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.01■□□□□ 0.15
CHRNA1P02708 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.01■□□□□ 0.15
CHRNA1P02708 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHRNA1P02708 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.01■□□□□ 0.15
CHRNA1P02708 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHRNA1P02708 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHRNA1P02708 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
CHRNA1P02708 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHRNA1P02708 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16■□□□□ 0.15
CHRNA1P02708 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16■□□□□ 0.15
CHRNA1P02708 AP000356.3-201ENST00000382243 753 ntBASIC16■□□□□ 0.15
CHRNA1P02708 MIR557-201ENST00000385239 98 ntBASIC16■□□□□ 0.15
CHRNA1P02708 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16■□□□□ 0.15
CHRNA1P02708 AL583805.1-201ENST00000391389 531 ntBASIC16■□□□□ 0.15
CHRNA1P02708 AL512430.1-201ENST00000392575 860 ntBASIC16■□□□□ 0.15
CHRNA1P02708 RPS9P1-201ENST00000419943 583 ntBASIC16■□□□□ 0.15
CHRNA1P02708 AL592076.1-201ENST00000424448 303 ntBASIC16■□□□□ 0.15
CHRNA1P02708 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16■□□□□ 0.15
CHRNA1P02708 NDUFS6P1-201ENST00000485187 316 ntBASIC16■□□□□ 0.15
CHRNA1P02708 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16■□□□□ 0.15
CHRNA1P02708 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16■□□□□ 0.15
CHRNA1P02708 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16■□□□□ 0.15
CHRNA1P02708 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 AC068418.2-201ENST00000577309 3703 ntBASIC16■□□□□ 0.15
CHRNA1P02708 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16■□□□□ 0.15
CHRNA1P02708 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16■□□□□ 0.15
CHRNA1P02708 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHRNA1P02708 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.99■□□□□ 0.15
CHRNA1P02708 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHRNA1P02708 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.99■□□□□ 0.15
CHRNA1P02708 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.99■□□□□ 0.15
CHRNA1P02708 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.99■□□□□ 0.15
CHRNA1P02708 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.99■□□□□ 0.15
CHRNA1P02708 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.99■□□□□ 0.15
CHRNA1P02708 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.99■□□□□ 0.15
CHRNA1P02708 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.99■□□□□ 0.15
CHRNA1P02708 AC135983.4-201ENST00000564116 1262 ntBASIC15.99■□□□□ 0.15
CHRNA1P02708 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 MIR4750-201ENST00000584564 56 ntBASIC15.99■□□□□ 0.15
CHRNA1P02708 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHRNA1P02708 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHRNA1P02708 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms