Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.26□□□□□ -0.29
APOC1P02654 AL390955.2-201ENST00000603032 514 ntBASIC13.26□□□□□ -0.29
APOC1P02654 AC106028.4-201ENST00000614509 607 ntBASIC13.26□□□□□ -0.29
APOC1P02654 AC007431.3-201ENST00000623221 587 ntBASIC13.26□□□□□ -0.29
APOC1P02654 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
APOC1P02654 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 AC005912.2-201ENST00000619492 2400 ntBASIC13.25□□□□□ -0.29
APOC1P02654 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.25□□□□□ -0.29
APOC1P02654 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APOC1P02654 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.25□□□□□ -0.29
APOC1P02654 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
APOC1P02654 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC1P02654 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
APOC1P02654 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC1P02654 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 AL391825.1-201ENST00000457671 1364 ntBASIC13.25□□□□□ -0.29
APOC1P02654 AC018665.1-201ENST00000622927 1362 ntBASIC13.25□□□□□ -0.29
APOC1P02654 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC1P02654 AL589987.1-201ENST00000453380 819 ntBASIC13.25□□□□□ -0.29
APOC1P02654 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 VDAC1P7-201ENST00000462417 847 ntBASIC13.25□□□□□ -0.29
APOC1P02654 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 SPDYE18-201ENST00000510091 1050 ntBASIC13.25□□□□□ -0.29
APOC1P02654 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC1P02654 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.25□□□□□ -0.29
APOC1P02654 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.25□□□□□ -0.29
APOC1P02654 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.25□□□□□ -0.29
APOC1P02654 BRI3BPP1-201ENST00000594224 787 ntBASIC13.25□□□□□ -0.29
APOC1P02654 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APOC1P02654 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC1P02654 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APOC1P02654 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.25□□□□□ -0.29
APOC1P02654 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
APOC1P02654 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC1P02654 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOC1P02654 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
APOC1P02654 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 INTS4P2-202ENST00000614726 2019 ntBASIC13.24□□□□□ -0.29
APOC1P02654 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOC1P02654 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC1P02654 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
APOC1P02654 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms