Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TIMP1P01033 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 AC020658.6-201ENST00000623564 1870 ntBASIC15.74■□□□□ 0.11
TIMP1P01033 AL591122.2-201ENST00000624125 1853 ntBASIC15.74■□□□□ 0.11
TIMP1P01033 AC126365.1-201ENST00000578585 1514 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP1P01033 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP1P01033 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 RNVU1-8-201ENST00000364272 125 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP1P01033 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TIMP1P01033 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 KRT18P46-201ENST00000435568 1279 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 AC083801.1-201ENST00000491689 358 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 RN7SL564P-201ENST00000496309 250 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.73■□□□□ 0.11
TIMP1P01033 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.73■□□□□ 0.11
TIMP1P01033 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TIMP1P01033 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 ABHD17AP9-201ENST00000561925 548 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.73■□□□□ 0.11
TIMP1P01033 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TIMP1P01033 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.73■□□□□ 0.11
TIMP1P01033 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 AC006504.5-208ENST00000588784 2401 ntBASIC15.73■□□□□ 0.11
TIMP1P01033 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TIMP1P01033 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 AC004554.1-201ENST00000422830 1468 ntBASIC15.72■□□□□ 0.11
TIMP1P01033 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TIMP1P01033 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TIMP1P01033 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.72■□□□□ 0.11
TIMP1P01033 HLA-DPA2-205ENST00000433582 733 ntBASIC15.72■□□□□ 0.11
TIMP1P01033 VENTXP4-201ENST00000449029 958 ntBASIC15.72■□□□□ 0.11
TIMP1P01033 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 AC008026.2-201ENST00000495438 348 ntBASIC15.72■□□□□ 0.11
TIMP1P01033 AC106047.2-201ENST00000511723 743 ntBASIC15.72■□□□□ 0.11
TIMP1P01033 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.72■□□□□ 0.11
TIMP1P01033 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.72■□□□□ 0.11
TIMP1P01033 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.72■□□□□ 0.11
TIMP1P01033 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms