Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.46□□□□□ -0.73
LINC01546A6NGU7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 KRT8P48-201ENST00000515599 1220 ntBASIC10.46□□□□□ -0.73
LINC01546A6NGU7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 AC064801.2-201ENST00000625052 1303 ntBASIC10.46□□□□□ -0.73
LINC01546A6NGU7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 PI4KAP2-201ENST00000360806 2080 ntBASIC10.46□□□□□ -0.74
LINC01546A6NGU7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01546A6NGU7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 VENTXP1-201ENST00000569334 2716 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AC139712.1-201ENST00000378256 1875 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 UXT-AS1-201ENST00000590504 1525 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 USP17L6P-201ENST00000382470 1197 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AC009955.4-201ENST00000597192 544 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms