Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 AC006453.4-201ENST00000636949 1252 ntBASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 AL354989.2-201ENST00000435838 1540 ntBASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 AC015802.1-201ENST00000588104 1449 ntBASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 PFN1P12-201ENST00000455938 534 ntBASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 RN7SL48P-201ENST00000579283 293 ntBASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 MIR4741-201ENST00000579822 90 ntBASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 AL603764.1-201ENST00000636452 321 ntBASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPDC1A2A3K4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 TPT1P11-201ENST00000458482 498 ntBASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 AC022447.6-201ENST00000515522 438 ntBASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 AC091271.1-201ENST00000611877 1162 ntBASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPDC1A2A3K4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms