Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 ELL2P1-201ENST00000413990 1906 ntBASIC12.97□□□□□ -0.33
SHISA3A0PJX4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SHISA3A0PJX4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 AL139385.1-201ENST00000611744 3272 ntBASIC12.96□□□□□ -0.33
SHISA3A0PJX4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 AL122018.1-201ENST00000446607 2310 ntBASIC12.96□□□□□ -0.33
SHISA3A0PJX4 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 KRT8P35-201ENST00000483942 1338 ntBASIC12.96□□□□□ -0.33
SHISA3A0PJX4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 MIR940-201ENST00000401276 94 ntBASIC12.96□□□□□ -0.33
SHISA3A0PJX4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 POLD2P1-201ENST00000511220 997 ntBASIC12.96□□□□□ -0.33
SHISA3A0PJX4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 DUX4L47-201ENST00000566374 394 ntBASIC12.96□□□□□ -0.33
SHISA3A0PJX4 AL671883.3-201ENST00000603274 991 ntBASIC12.96□□□□□ -0.33
SHISA3A0PJX4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SHISA3A0PJX4 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SHISA3A0PJX4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 AC135782.3-201ENST00000562782 2105 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 PCDHB18P-202ENST00000526308 3197 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 KRT18P13-201ENST00000400056 1290 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 AC004832.2-201ENST00000426397 482 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 AC040169.1-201ENST00000565382 521 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 GPALPP1-207ENST00000611650 899 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 AL158212.4-201ENST00000624062 1286 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 SBF1P1-201ENST00000444527 5631 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms