Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AL355802.2-201ENST00000402069 882 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 DUSP5P2-201ENST00000426873 1033 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AL158047.1-201ENST00000445918 881 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AC024243.1-201ENST00000609234 778 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 STX16-202ENST00000355957 4897 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 AL357054.4-201ENST00000606285 2814 ntBASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LINC01558Q9Y6Z2 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
LINC01558Q9Y6Z2 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 EVL-214ENST00000555048 1715 ntTSL 3 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms