Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHB7Q9Y5E2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHB7Q9Y5E2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHB7Q9Y5E2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB7Q9Y5E2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHB7Q9Y5E2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 TMBIM7P-202ENST00000641474 1516 ntBASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 CAP2P1-201ENST00000557743 1390 ntBASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AC018629.1-201ENST00000623381 1736 ntBASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 RN7SL181P-201ENST00000462921 277 ntBASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 MIR3188-201ENST00000583494 85 ntBASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AC015909.3-201ENST00000572855 1794 ntBASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHB7Q9Y5E2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 AL136172.1-201ENST00000598590 1394 ntBASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 AP003419.4-201ENST00000616071 517 ntBASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 AHCYP4-201ENST00000419201 1315 ntBASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHB7Q9Y5E2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHB7Q9Y5E2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms