Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 GCSHP3-201ENST00000431120 391 ntBASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 DGAT2L7P-201ENST00000602462 744 ntBASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
SHROOM4Q9ULL8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 COX20P1-201ENST00000366529 357 ntBASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 AC009884.2-201ENST00000603110 324 ntBASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 LINC01783-202ENST00000614408 828 ntBASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 BX284668.2-205ENST00000619677 828 ntBASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
SHROOM4Q9ULL8 LINC01165-201ENST00000445190 1623 ntBASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 KRT18P36-201ENST00000411618 1276 ntBASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 TLE1P1-201ENST00000422965 589 ntBASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 AC005041.3-201ENST00000606287 649 ntBASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SHROOM4Q9ULL8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 BAK1P1-201ENST00000317045 636 ntBASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 HIST2H2BA-201ENST00000412169 381 ntBASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 AL157407.1-201ENST00000435784 904 ntBASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SHROOM4Q9ULL8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 TSPY25P-201ENST00000429463 745 ntBASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 AC107464.3-201ENST00000609172 737 ntBASIC27.83■■■□□ 2.05
SHROOM4Q9ULL8 PLS3-210ENST00000626746 216 ntTSL 4 BASIC27.83■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms