Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 AC139749.1-202ENST00000617529 3139 ntBASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HCN3Q9P1Z3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 FAM21FP-201ENST00000426241 1131 ntBASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 RPS2P32-201ENST00000439199 892 ntBASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 YBX1P6-201ENST00000442962 1002 ntBASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 AC023310.1-201ENST00000554836 735 ntBASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 MIR6752-201ENST00000618442 71 ntBASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 AC023908.3-201ENST00000564211 3047 ntBASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.22□□□□□ -0.13
HCN3Q9P1Z3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 CD8B2-202ENST00000417670 633 ntBASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AC007274.1-201ENST00000439805 662 ntBASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AL391280.1-201ENST00000506969 1062 ntBASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AC009542.2-202ENST00000619004 1067 ntBASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 AC008687.7-202ENST00000637404 953 ntBASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.21□□□□□ -0.13
HCN3Q9P1Z3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms