Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 DFFBP1-201ENST00000433250 979 ntBASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 AC092337.1-201ENST00000568699 1129 ntBASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CALCOCO1Q9P1Z2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 AC131902.2-201ENST00000566892 2172 ntBASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 SLED1-202ENST00000512051 380 ntBASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 SRD5A3P1-201ENST00000603021 949 ntBASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 AC015909.5-201ENST00000624336 2266 ntBASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 AC105206.1-202ENST00000314927 2368 ntBASIC16.4■□□□□ 0.22
CALCOCO1Q9P1Z2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CALCOCO1Q9P1Z2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 SPDYE19P-201ENST00000338590 713 ntBASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 AC098614.1-201ENST00000368528 745 ntBASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 U91328.1-201ENST00000437528 223 ntBASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 DOC2GP-202ENST00000514950 1163 ntBASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 AL391069.4-201ENST00000609583 481 ntBASIC16.39■□□□□ 0.21
CALCOCO1Q9P1Z2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms