Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 DOC2GP-204ENST00000639052 2548 ntBASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC52A1Q9NWF4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 LINC00528-201ENST00000600723 2160 ntBASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 SCARNA12-201ENST00000459155 270 ntBASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 LINC00244-201ENST00000625073 613 ntBASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC52A1Q9NWF4 AL672207.1-201ENST00000328462 1570 ntBASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 GNG10P1-201ENST00000452289 199 ntBASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 RNF146-211ENST00000609447 607 ntTSL 4 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC52A1Q9NWF4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 AL162727.3-201ENST00000635661 2787 ntBASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 RNVU1-8-201ENST00000364272 125 ntBASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 SERF2-206ENST00000409291 807 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 RN7SL767P-201ENST00000493013 295 ntBASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.79■□□□□ 0.92
SLC52A1Q9NWF4 AL118516.1-201ENST00000564152 670 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms