Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 AC098850.1-201ENST00000419919 790 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 EIF3FP3-201ENST00000434851 1086 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 RN7SL121P-201ENST00000584223 273 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 AC017083.2-201ENST00000608069 979 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 MIR6799-201ENST00000620297 69 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 AC139749.1-202ENST00000617529 3139 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 HSPA7-201ENST00000445535 1927 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 KRT8P35-201ENST00000483942 1338 ntBASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.11□□□□□ -0.15
NEUROD4Q9HD90 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 SALL4P5-201ENST00000419001 1760 ntBASIC14.1□□□□□ -0.15
NEUROD4Q9HD90 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms