Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 TPT1P11-201ENST00000458482 498 ntBASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC069262.1-201ENST00000539058 672 ntBASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC010327.4-202ENST00000591484 748 ntBASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC000095.1-201ENST00000603208 874 ntBASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 TEX28P1-201ENST00000613479 1221 ntBASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 TEX28P2-201ENST00000617764 1221 ntBASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CICP16-201ENST00000502609 2813 ntBASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC018665.1-201ENST00000622927 1362 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC211486.1-202ENST00000416371 468 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC211476.1-201ENST00000503899 468 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 TIMM17BP1-201ENST00000545713 516 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC010336.2-201ENST00000564226 506 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 SPDYE12P-201ENST00000618416 771 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 AC004461.2-201ENST00000629517 803 ntBASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CMSS1Q9BQ75 NUTM2HP-201ENST00000442076 2498 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms