Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COL12A1Q99715 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COL12A1Q99715 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.65□□□□□ -0.38
COL12A1Q99715 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.65□□□□□ -0.38
COL12A1Q99715 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 AC019109.1-201ENST00000401725 1874 ntBASIC12.65□□□□□ -0.38
COL12A1Q99715 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.65□□□□□ -0.38
COL12A1Q99715 AC025186.1-201ENST00000478174 870 ntBASIC12.65□□□□□ -0.38
COL12A1Q99715 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC12.65□□□□□ -0.38
COL12A1Q99715 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.65□□□□□ -0.38
COL12A1Q99715 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
COL12A1Q99715 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COL12A1Q99715 ZBED1P1-201ENST00000502364 1930 ntBASIC12.65□□□□□ -0.38
COL12A1Q99715 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 TREX1-203ENST00000456089 629 ntTSL 3 BASIC12.65□□□□□ -0.38
COL12A1Q99715 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COL12A1Q99715 RN7SL478P-201ENST00000584358 298 ntBASIC12.65□□□□□ -0.38
COL12A1Q99715 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
COL12A1Q99715 AL118522.1-201ENST00000611368 560 ntBASIC12.65□□□□□ -0.38
COL12A1Q99715 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
COL12A1Q99715 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.39
COL12A1Q99715 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.65□□□□□ -0.39
COL12A1Q99715 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
COL12A1Q99715 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
COL12A1Q99715 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SPTLC1P3-201ENST00000403408 259 ntBASIC12.64□□□□□ -0.39
COL12A1Q99715 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 RPL18AP8-201ENST00000486071 528 ntBASIC12.64□□□□□ -0.39
COL12A1Q99715 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.64□□□□□ -0.39
COL12A1Q99715 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 AC245369.7-201ENST00000631386 350 ntBASIC12.64□□□□□ -0.39
COL12A1Q99715 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 GUCY2EP-203ENST00000531117 1918 ntBASIC12.64□□□□□ -0.39
COL12A1Q99715 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.64□□□□□ -0.39
COL12A1Q99715 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.64□□□□□ -0.39
COL12A1Q99715 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.64□□□□□ -0.39
COL12A1Q99715 AL080243.1-201ENST00000423293 1060 ntBASIC12.64□□□□□ -0.39
COL12A1Q99715 AL954722.1-201ENST00000431238 259 ntBASIC12.64□□□□□ -0.39
COL12A1Q99715 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC12.64□□□□□ -0.39
COL12A1Q99715 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
COL12A1Q99715 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.64□□□□□ -0.39
COL12A1Q99715 EMP3-204ENST00000596315 761 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
COL12A1Q99715 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL12A1Q99715 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
COL12A1Q99715 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL12A1Q99715 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
COL12A1Q99715 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC12.63□□□□□ -0.39
COL12A1Q99715 OR8T1P-201ENST00000421347 918 ntBASIC12.63□□□□□ -0.39
COL12A1Q99715 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COL12A1Q99715 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.63□□□□□ -0.39
COL12A1Q99715 MIR4746-201ENST00000579802 71 ntBASIC12.63□□□□□ -0.39
COL12A1Q99715 AC138627.1-201ENST00000641127 1257 ntBASIC12.63□□□□□ -0.39
COL12A1Q99715 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL12A1Q99715 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.63□□□□□ -0.39
COL12A1Q99715 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL12A1Q99715 BRD7P5-201ENST00000299197 1822 ntBASIC12.63□□□□□ -0.39
COL12A1Q99715 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
COL12A1Q99715 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL12A1Q99715 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms