Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 AC084262.1-201ENST00000567818 751 ntBASIC16.01■□□□□ 0.15
LRCH3Q96II8 AC018846.1-201ENST00000568231 183 ntBASIC16.01■□□□□ 0.15
LRCH3Q96II8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 AL603764.1-201ENST00000636452 321 ntBASIC16.01■□□□□ 0.15
LRCH3Q96II8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 LINC01815-202ENST00000641468 1409 ntBASIC16.01■□□□□ 0.15
LRCH3Q96II8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH3Q96II8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH3Q96II8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
LRCH3Q96II8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
LRCH3Q96II8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRCH3Q96II8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 AL672207.1-201ENST00000328462 1570 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 HLA-DQB1-202ENST00000399079 1501 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 AC021305.1-201ENST00000520656 1514 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRCH3Q96II8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16■□□□□ 0.15
LRCH3Q96II8 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 CHCHD2P2-201ENST00000503744 321 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
LRCH3Q96II8 BCL2L12P1-201ENST00000508390 733 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC16■□□□□ 0.15
LRCH3Q96II8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16■□□□□ 0.15
LRCH3Q96II8 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16■□□□□ 0.15
LRCH3Q96II8 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16■□□□□ 0.15
LRCH3Q96II8 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 AC009884.2-201ENST00000603110 324 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 AP000322.3-201ENST00000608665 388 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 AL133445.2-201ENST00000611191 527 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 AC068418.2-201ENST00000577309 3703 ntBASIC16■□□□□ 0.15
LRCH3Q96II8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH3Q96II8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16■□□□□ 0.15
LRCH3Q96II8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
LRCH3Q96II8 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16■□□□□ 0.15
LRCH3Q96II8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
LRCH3Q96II8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.99■□□□□ 0.15
LRCH3Q96II8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.99■□□□□ 0.15
LRCH3Q96II8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.99■□□□□ 0.15
LRCH3Q96II8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH3Q96II8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LRCH3Q96II8 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.99■□□□□ 0.15
LRCH3Q96II8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.99■□□□□ 0.15
LRCH3Q96II8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms