Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 AC020907.1-201ENST00000616460 1350 ntBASIC17.73■□□□□ 0.43
DDX11Q96FC9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 DUX4L45-201ENST00000566406 1057 ntBASIC17.72■□□□□ 0.43
DDX11Q96FC9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.72■□□□□ 0.43
DDX11Q96FC9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
DDX11Q96FC9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 KRT8P35-201ENST00000483942 1338 ntBASIC17.72■□□□□ 0.43
DDX11Q96FC9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX11Q96FC9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.71■□□□□ 0.43
DDX11Q96FC9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX11Q96FC9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms