Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 AC007191.1-201ENST00000623179 2995 ntBASIC14.44□□□□□ -0.1
RNF31Q96EP0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RNF31Q96EP0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF31Q96EP0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 AC007292.2-201ENST00000593524 1812 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 HLA-K-203ENST00000430151 1046 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 FNTAP2-201ENST00000430308 634 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 HIST2H2BC-201ENST00000498492 580 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 AC005730.2-201ENST00000564549 1184 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 AC103810.3-201ENST00000583567 96 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.43□□□□□ -0.1
RNF31Q96EP0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 SSR4P1-203ENST00000599569 2260 ntBASIC14.43□□□□□ -0.1
RNF31Q96EP0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RNF31Q96EP0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 INE2-201ENST00000630399 1874 ntBASIC14.42□□□□□ -0.1
RNF31Q96EP0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF31Q96EP0 GRK6P1-201ENST00000400595 1711 ntBASIC14.42□□□□□ -0.1
RNF31Q96EP0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.42□□□□□ -0.1
RNF31Q96EP0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.42□□□□□ -0.1
RNF31Q96EP0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF31Q96EP0 AP001258.2-201ENST00000529891 490 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms