Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 AC092135.3-201ENST00000624151 1846 ntBASIC14.75□□□□□ -0.05
SCAMP4Q969E2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.75□□□□□ -0.05
SCAMP4Q969E2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 PUDPP3-201ENST00000445368 636 ntBASIC14.74□□□□□ -0.05
SCAMP4Q969E2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 PFN1P12-201ENST00000455938 534 ntBASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AC005730.2-201ENST00000564549 1184 ntBASIC14.74□□□□□ -0.05
SCAMP4Q969E2 MIR4783-201ENST00000580343 82 ntBASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 MIR6869-201ENST00000619434 62 ntBASIC14.74□□□□□ -0.05
SCAMP4Q969E2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 AC023824.1-201ENST00000562945 2975 ntBASIC14.74□□□□□ -0.05
SCAMP4Q969E2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCAMP4Q969E2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.73□□□□□ -0.05
SCAMP4Q969E2 MIR663B-201ENST00000408361 115 ntBASIC14.73□□□□□ -0.05
SCAMP4Q969E2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 AC010141.1-201ENST00000411585 623 ntBASIC14.73□□□□□ -0.05
SCAMP4Q969E2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 AC104306.2-201ENST00000451877 341 ntBASIC14.73□□□□□ -0.05
SCAMP4Q969E2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCAMP4Q969E2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms