Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AC022217.1-201ENST00000521069 738 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AP001258.2-201ENST00000529891 490 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 PGAM1P5-201ENST00000548011 764 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AC124068.2-201ENST00000569473 1109 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 MIR4525-201ENST00000580000 75 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AL136295.7-201ENST00000619226 1200 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AC090386.2-201ENST00000623010 1039 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AC020910.6-201ENST00000623084 1459 ntBASIC13.28□□□□□ -0.28
RNF138Q8WVD3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AC018629.1-201ENST00000623381 1736 ntBASIC13.27□□□□□ -0.28
RNF138Q8WVD3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF138Q8WVD3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF138Q8WVD3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.26□□□□□ -0.29
RNF138Q8WVD3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF138Q8WVD3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms