Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 RCC2P8-201ENST00000502779 1035 ntBASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AP002803.1-201ENST00000528836 498 ntBASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AL132994.2-201ENST00000603120 687 ntBASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 AC079112.1-201ENST00000454972 939 ntBASIC17■□□□□ 0.31
U2AF1L4Q8WU68 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 AC242376.2-201ENST00000619355 883 ntBASIC17■□□□□ 0.31
U2AF1L4Q8WU68 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 AC112693.3-201ENST00000624819 1983 ntBASIC17■□□□□ 0.31
U2AF1L4Q8WU68 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
U2AF1L4Q8WU68 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 CLUHP2-201ENST00000426660 1303 ntBASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 AL157792.1-201ENST00000488281 530 ntBASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 AL031713.1-201ENST00000564813 661 ntBASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 MIR4649-201ENST00000582839 64 ntBASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 AC009955.4-201ENST00000597192 544 ntBASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 AL136301.1-201ENST00000615830 422 ntBASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.99■□□□□ 0.31
U2AF1L4Q8WU68 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms