Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.84■□□□□ 0.13
LMO3Q8TAP4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LMO3Q8TAP4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LMO3Q8TAP4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LMO3Q8TAP4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.83■□□□□ 0.13
LMO3Q8TAP4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LMO3Q8TAP4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 HIST2H2BB-201ENST00000449108 381 ntBASIC15.83■□□□□ 0.12
LMO3Q8TAP4 KLF2P4-201ENST00000451959 1225 ntBASIC15.83■□□□□ 0.12
LMO3Q8TAP4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 AC119751.2-201ENST00000504529 210 ntBASIC15.83■□□□□ 0.12
LMO3Q8TAP4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 MIR6775-201ENST00000617557 69 ntBASIC15.83■□□□□ 0.12
LMO3Q8TAP4 AC027601.3-201ENST00000622907 509 ntBASIC15.83■□□□□ 0.12
LMO3Q8TAP4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 HSPA8P5-201ENST00000456928 2069 ntBASIC15.83■□□□□ 0.12
LMO3Q8TAP4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LMO3Q8TAP4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 SHC1P1-201ENST00000425230 1745 ntBASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 AL355994.2-201ENST00000447882 704 ntBASIC15.82■□□□□ 0.12
LMO3Q8TAP4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 AC009093.10-201ENST00000641956 1442 ntBASIC15.82■□□□□ 0.12
LMO3Q8TAP4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms