Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAM1L1Q8N609 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 ACTBP11-201ENST00000436287 1126 ntBASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 PFN1P12-201ENST00000455938 534 ntBASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AC103702.1-201ENST00000548801 2630 ntBASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AC015688.4-201ENST00000580780 1647 ntBASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRAM1L1Q8N609 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TRAM1L1Q8N609 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.65□□□□□ -0.07
TRAM1L1Q8N609 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
TRAM1L1Q8N609 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AC113367.3-201ENST00000508316 1912 ntBASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AGGF1P1-201ENST00000509500 2073 ntBASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 FAM58BP-201ENST00000439056 645 ntBASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 TPT1P11-201ENST00000458482 498 ntBASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AC022447.6-201ENST00000515522 438 ntBASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AC100827.2-201ENST00000563214 1194 ntBASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 MIR4783-201ENST00000580343 82 ntBASIC14.64□□□□□ -0.07
TRAM1L1Q8N609 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms