Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AL023803.2-201ENST00000620080 638 ntBASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 DPM3-202ENST00000368399 517 ntBASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 MIR1247-201ENST00000408206 136 ntBASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 GPAA1P2-201ENST00000417923 928 ntBASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 VDAC1P1-201ENST00000439229 848 ntBASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 AL022328.3-201ENST00000607943 679 ntBASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 AP000346.4-201ENST00000614827 381 ntBASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ARHGEF39Q8N4T4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ARHGEF39Q8N4T4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ARHGEF39Q8N4T4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
ARHGEF39Q8N4T4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
ARHGEF39Q8N4T4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
ARHGEF39Q8N4T4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ARHGEF39Q8N4T4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ARHGEF39Q8N4T4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 AGGF1P1-201ENST00000509500 2073 ntBASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 TMBIM7P-202ENST00000641474 1516 ntBASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.95□□□□□ -0.18
ARHGEF39Q8N4T4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms