Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 AL035414.1-201ENST00000451327 857 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 SCARNA21-201ENST00000517026 139 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 NPM1P43-201ENST00000558669 786 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 AL031713.1-201ENST00000564813 661 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 MIR6720-201ENST00000611664 98 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 Z98259.2-201ENST00000641583 609 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 KRT8P21-201ENST00000430398 1491 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 RPSAP31-201ENST00000416648 895 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 KLF2P1-201ENST00000447438 1042 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 RN7SL818P-201ENST00000485099 259 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 RN7SL725P-201ENST00000606439 259 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 BX088702.1-201ENST00000610784 235 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 RN7SL736P-201ENST00000613111 269 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 AC092127.1-201ENST00000567093 3455 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 AC020910.5-201ENST00000623668 1865 ntBASIC15.07■□□□□ 0
SYNPOQ8N3V7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.07■□□□□ 0
SYNPOQ8N3V7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.07■□□□□ 0
SYNPOQ8N3V7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms