Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 RN7SL399P-201ENST00000471648 279 ntBASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 AC093214.1-201ENST00000511688 1107 ntBASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 DOC2GP-202ENST00000514950 1163 ntBASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 AL662799.1-202ENST00000614205 422 ntBASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLIP4Q8N3C7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 SPDYE19P-201ENST00000338590 713 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 BASP1P1-201ENST00000430708 665 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 GNAQP1-201ENST00000444815 1067 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 AC026410.3-201ENST00000514280 936 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 TPRX2P-201ENST00000535362 881 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 AC036164.1-201ENST00000570544 333 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 AC107373.2-201ENST00000607735 490 ntBASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLIP4Q8N3C7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms